Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 SART3-203ENST00000546611 1184 ntBASIC16.87■□□□□ 0.29
PRICKLE3O43900 AL160237.2-201ENST00000556165 472 ntBASIC16.87■□□□□ 0.29
PRICKLE3O43900 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 AL356309.3-201ENST00000624132 1934 ntBASIC16.87■□□□□ 0.29
PRICKLE3O43900 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AC148477.5-201ENST00000625164 1645 ntBASIC16.86■□□□□ 0.29
PRICKLE3O43900 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 LYSMD4-203ENST00000378904 2122 ntBASIC16.86■□□□□ 0.29
PRICKLE3O43900 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 KLF4P1-201ENST00000412782 1185 ntBASIC16.86■□□□□ 0.29
PRICKLE3O43900 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AL020989.1-201ENST00000422979 469 ntBASIC16.86■□□□□ 0.29
PRICKLE3O43900 STK19B-204ENST00000512515 211 ntBASIC16.86■□□□□ 0.29
PRICKLE3O43900 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AL139288.1-201ENST00000623748 933 ntBASIC16.86■□□□□ 0.29
PRICKLE3O43900 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.86■□□□□ 0.29
PRICKLE3O43900 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRICKLE3O43900 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 AP002469.2-201ENST00000531724 424 ntBASIC16.85■□□□□ 0.29
PRICKLE3O43900 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PRICKLE3O43900 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRICKLE3O43900 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms