Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC28A2O43868 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC28A2O43868 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.98■□□□□ 0.31
SLC28A2O43868 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SLC28A2O43868 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC28A2O43868 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A2O43868 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC28A2O43868 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC28A2O43868 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SLC28A2O43868 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A2O43868 LINC01126-201ENST00000623515 1646 ntBASIC16.98■□□□□ 0.31
SLC28A2O43868 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A2O43868 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC28A2O43868 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A2O43868 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SLC28A2O43868 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A2O43868 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A2O43868 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC28A2O43868 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC28A2O43868 NSUN5P1-202ENST00000421140 1535 ntBASIC16.97■□□□□ 0.31
SLC28A2O43868 NSUN5P2-203ENST00000457352 1529 ntBASIC16.97■□□□□ 0.31
SLC28A2O43868 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SLC28A2O43868 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A2O43868 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 MIR3687-2-201ENST00000577708 61 ntBASIC16.97■□□□□ 0.31
SLC28A2O43868 MIR3917-201ENST00000580971 93 ntBASIC16.97■□□□□ 0.31
SLC28A2O43868 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A2O43868 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC28A2O43868 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 MIR3687-1-201ENST00000614492 61 ntBASIC16.97■□□□□ 0.31
SLC28A2O43868 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A2O43868 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SLC28A2O43868 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A2O43868 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A2O43868 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 AC093010.1-201ENST00000473625 1624 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC28A2O43868 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC28A2O43868 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC28A2O43868 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A2O43868 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC28A2O43868 MINOS1P3-201ENST00000457048 203 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 AP003733.1-201ENST00000491725 852 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 MIR3180-4-201ENST00000582223 153 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC28A2O43868 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC28A2O43868 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 AC010240.3-201ENST00000607688 395 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC28A2O43868 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC28A2O43868 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.96■□□□□ 0.31
SLC28A2O43868 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLC28A2O43868 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC28A2O43868 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A2O43868 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms