Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 SIRPAP1-201ENST00000448467 1770 ntBASIC15.68■□□□□ 0.1
TRAF3IP2O43734 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 AC096582.2-201ENST00000510860 516 ntBASIC15.68■□□□□ 0.1
TRAF3IP2O43734 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP2O43734 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 AC139713.2-201ENST00000641328 2723 ntBASIC15.67■□□□□ 0.1
TRAF3IP2O43734 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 LYSMD4-203ENST00000378904 2122 ntBASIC15.67■□□□□ 0.1
TRAF3IP2O43734 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 OR6D1P-202ENST00000641007 5290 ntBASIC15.67■□□□□ 0.1
TRAF3IP2O43734 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP2O43734 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 AL049757.1-201ENST00000616842 1596 ntBASIC15.66■□□□□ 0.1
TRAF3IP2O43734 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 AC109462.3-201ENST00000573934 613 ntBASIC15.66■□□□□ 0.1
TRAF3IP2O43734 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF3IP2O43734 AL139327.4-201ENST00000612362 153 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms