Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.72■□□□□ 0.75
ACTN4O43707 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.72■□□□□ 0.75
ACTN4O43707 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.72■□□□□ 0.75
ACTN4O43707 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.72■□□□□ 0.75
ACTN4O43707 LINC01238-205ENST00000567549 1107 ntBASIC19.72■□□□□ 0.75
ACTN4O43707 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 AC124864.1-201ENST00000623408 392 ntBASIC19.72■□□□□ 0.75
ACTN4O43707 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
ACTN4O43707 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTN4O43707 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN4O43707 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ACTN4O43707 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN4O43707 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.71■□□□□ 0.75
ACTN4O43707 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.71■□□□□ 0.75
ACTN4O43707 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
ACTN4O43707 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.71■□□□□ 0.75
ACTN4O43707 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
ACTN4O43707 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN4O43707 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.71■□□□□ 0.75
ACTN4O43707 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ACTN4O43707 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.71■□□□□ 0.75
ACTN4O43707 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.71■□□□□ 0.75
ACTN4O43707 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.71■□□□□ 0.75
ACTN4O43707 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTN4O43707 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTN4O43707 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ACTN4O43707 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTN4O43707 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTN4O43707 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ACTN4O43707 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ACTN4O43707 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTN4O43707 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ACTN4O43707 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 AL031133.1-201ENST00000406807 723 ntBASIC19.7■□□□□ 0.74
ACTN4O43707 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
ACTN4O43707 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ACTN4O43707 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTN4O43707 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTN4O43707 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.7■□□□□ 0.74
ACTN4O43707 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTN4O43707 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTN4O43707 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.69■□□□□ 0.74
ACTN4O43707 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ACTN4O43707 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTN4O43707 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms