Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2AO43633 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHMP2AO43633 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMP2AO43633 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMP2AO43633 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
CHMP2AO43633 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 AL356309.3-201ENST00000624132 1934 ntBASIC19.78■□□□□ 0.76
CHMP2AO43633 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHMP2AO43633 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2AO43633 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2AO43633 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CHMP2AO43633 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP2AO43633 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHMP2AO43633 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2AO43633 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2AO43633 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2AO43633 AL355312.1-201ENST00000407115 2176 ntBASIC19.77■□□□□ 0.76
CHMP2AO43633 AC132938.5-201ENST00000624980 1813 ntBASIC19.77■□□□□ 0.76
CHMP2AO43633 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2AO43633 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMP2AO43633 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP2AO43633 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP2AO43633 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CHMP2AO43633 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP2AO43633 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP2AO43633 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP2AO43633 AC148477.8-201ENST00000624298 468 ntBASIC19.77■□□□□ 0.76
CHMP2AO43633 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CHMP2AO43633 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2AO43633 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP2AO43633 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CHMP2AO43633 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP2AO43633 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP2AO43633 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CHMP2AO43633 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CHMP2AO43633 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP2AO43633 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP2AO43633 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CHMP2AO43633 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP2AO43633 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 AC134043.2-201ENST00000624206 2238 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP2AO43633 AL353593.2-201ENST00000602529 1483 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 FDX1P1-201ENST00000449115 551 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 SCARNA2-201ENST00000458748 420 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP2AO43633 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP2AO43633 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 NKAPP1-205ENST00000585790 367 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 SLC25A6P4-201ENST00000586535 553 ntBASIC19.76■□□□□ 0.75
CHMP2AO43633 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP2AO43633 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP2AO43633 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP2AO43633 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP2AO43633 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2AO43633 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2AO43633 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CHMP2AO43633 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms