Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.21□□□□□ -0.29
SNAI2O43623 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 MFAP1P1-201ENST00000442257 1255 ntBASIC13.21□□□□□ -0.29
SNAI2O43623 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SNAI2O43623 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 DOC2GP-204ENST00000639052 2548 ntBASIC13.21□□□□□ -0.29
SNAI2O43623 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNAI2O43623 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.21□□□□□ -0.29
SNAI2O43623 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.21□□□□□ -0.3
SNAI2O43623 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.21□□□□□ -0.3
SNAI2O43623 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNAI2O43623 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.2□□□□□ -0.3
SNAI2O43623 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 AL136379.1-201ENST00000623471 2642 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 ESRRAP1-201ENST00000400596 1257 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.2□□□□□ -0.3
SNAI2O43623 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 KRT18P23-201ENST00000435622 1283 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.2□□□□□ -0.3
SNAI2O43623 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.2□□□□□ -0.3
SNAI2O43623 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.2□□□□□ -0.3
SNAI2O43623 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 MIR4674-201ENST00000582457 87 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 AL024508.2-201ENST00000607749 1894 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SNAI2O43623 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.2□□□□□ -0.3
SNAI2O43623 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.2□□□□□ -0.3
SNAI2O43623 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 AC079328.2-201ENST00000561241 3354 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 AC132872.4-202ENST00000622924 2756 ntBASIC13.2□□□□□ -0.3
SNAI2O43623 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
SNAI2O43623 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNAI2O43623 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SNAI2O43623 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNAI2O43623 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.19□□□□□ -0.3
SNAI2O43623 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SNAI2O43623 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNAI2O43623 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms