Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.75■□□□□ 0.43
SMAD6O43541 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.75■□□□□ 0.43
SMAD6O43541 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.74■□□□□ 0.43
SMAD6O43541 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.74■□□□□ 0.43
SMAD6O43541 AC139887.3-201ENST00000568585 713 ntBASIC17.74■□□□□ 0.43
SMAD6O43541 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.74■□□□□ 0.43
SMAD6O43541 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SMAD6O43541 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.74■□□□□ 0.43
SMAD6O43541 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.74■□□□□ 0.43
SMAD6O43541 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.74■□□□□ 0.43
SMAD6O43541 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.74■□□□□ 0.43
SMAD6O43541 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.74■□□□□ 0.43
SMAD6O43541 LINC01451-201ENST00000623792 534 ntBASIC17.74■□□□□ 0.43
SMAD6O43541 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMAD6O43541 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMAD6O43541 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.74■□□□□ 0.43
SMAD6O43541 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SMAD6O43541 AC067852.2-201ENST00000590513 2313 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 IL9RP2-201ENST00000423948 1312 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMAD6O43541 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SMAD6O43541 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMAD6O43541 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 MYCLP1-201ENST00000372451 1075 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.73■□□□□ 0.43
SMAD6O43541 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMAD6O43541 SIGLEC30P-201ENST00000455569 941 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.73■□□□□ 0.43
SMAD6O43541 AC120114.3-201ENST00000611923 658 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.73■□□□□ 0.43
SMAD6O43541 BX640515.1-201ENST00000617215 977 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 AC008735.5-201ENST00000623544 497 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
SMAD6O43541 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.73■□□□□ 0.43
SMAD6O43541 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SMAD6O43541 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SMAD6O43541 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
SMAD6O43541 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 AC068880.1-201ENST00000507289 2297 ntBASIC17.73■□□□□ 0.43
SMAD6O43541 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMAD6O43541 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SMAD6O43541 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
SMAD6O43541 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
SMAD6O43541 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.72■□□□□ 0.43
SMAD6O43541 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 AP002414.3-201ENST00000589352 1468 ntBASIC17.72■□□□□ 0.43
SMAD6O43541 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 RPS2P28-201ENST00000314255 741 ntBASIC17.72■□□□□ 0.43
SMAD6O43541 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMAD6O43541 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.72■□□□□ 0.43
SMAD6O43541 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.72■□□□□ 0.43
SMAD6O43541 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms