Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.87■□□□□ 0.61
TNRC18O15417 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
TNRC18O15417 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.87■□□□□ 0.61
TNRC18O15417 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNRC18O15417 AC087499.6-201ENST00000411576 835 ntBASIC18.87■□□□□ 0.61
TNRC18O15417 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.87■□□□□ 0.61
TNRC18O15417 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.87■□□□□ 0.61
TNRC18O15417 AC093004.1-201ENST00000508850 424 ntBASIC18.87■□□□□ 0.61
TNRC18O15417 SPDYE18-201ENST00000510091 1050 ntBASIC18.87■□□□□ 0.61
TNRC18O15417 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.87■□□□□ 0.61
TNRC18O15417 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.86■□□□□ 0.61
TNRC18O15417 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.86■□□□□ 0.61
TNRC18O15417 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 CALR4P-201ENST00000431943 946 ntBASIC18.86■□□□□ 0.61
TNRC18O15417 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.86■□□□□ 0.61
TNRC18O15417 AC135586.1-201ENST00000539323 574 ntBASIC18.86■□□□□ 0.61
TNRC18O15417 AC007967.4-201ENST00000614700 386 ntBASIC18.86■□□□□ 0.61
TNRC18O15417 AL161645.1-201ENST00000622716 1255 ntBASIC18.86■□□□□ 0.61
TNRC18O15417 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.86■□□□□ 0.61
TNRC18O15417 ELK1P1-201ENST00000485699 580 ntBASIC18.86■□□□□ 0.61
TNRC18O15417 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNRC18O15417 AP001889.1-201ENST00000525414 633 ntBASIC18.86■□□□□ 0.61
TNRC18O15417 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.86■□□□□ 0.61
TNRC18O15417 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.86■□□□□ 0.61
TNRC18O15417 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.86■□□□□ 0.61
TNRC18O15417 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNRC18O15417 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 SPDYE19P-201ENST00000338590 713 ntBASIC18.85■□□□□ 0.61
TNRC18O15417 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.85■□□□□ 0.61
TNRC18O15417 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
TNRC18O15417 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC18.85■□□□□ 0.61
TNRC18O15417 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.85■□□□□ 0.61
TNRC18O15417 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.85■□□□□ 0.61
TNRC18O15417 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 AC128714.1-201ENST00000637035 887 ntBASIC18.85■□□□□ 0.61
TNRC18O15417 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNRC18O15417 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
TNRC18O15417 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.85■□□□□ 0.61
TNRC18O15417 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.85■□□□□ 0.61
TNRC18O15417 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TNRC18O15417 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 AC107918.2-201ENST00000530817 355 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TNRC18O15417 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TNRC18O15417 PDIA3P1-201ENST00000471856 1510 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
TNRC18O15417 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TNRC18O15417 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 USP32P1-208ENST00000506594 1164 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.84■□□□□ 0.61
TNRC18O15417 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.84■□□□□ 0.61
TNRC18O15417 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.84■□□□□ 0.61
TNRC18O15417 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
TNRC18O15417 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNRC18O15417 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.84■□□□□ 0.61
TNRC18O15417 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNRC18O15417 AC234644.1-201ENST00000406065 370 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.84■□□□□ 0.61
TNRC18O15417 AC007551.1-201ENST00000457394 519 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.84■□□□□ 0.61
TNRC18O15417 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.84■□□□□ 0.61
TNRC18O15417 RPSAP52-203ENST00000622976 1023 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 AL645728.2-201ENST00000641974 660 ntBASIC18.84■□□□□ 0.61
TNRC18O15417 BTBD7P1-201ENST00000447253 1453 ntBASIC18.83■□□□□ 0.61
TNRC18O15417 AC018665.1-201ENST00000622927 1362 ntBASIC18.83■□□□□ 0.61
TNRC18O15417 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNRC18O15417 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TNRC18O15417 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.83■□□□□ 0.61
TNRC18O15417 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.83■□□□□ 0.6
TNRC18O15417 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms