Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.08■□□□□ 0.81
ATP2A1O14983 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP2A1O14983 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
ATP2A1O14983 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP2A1O14983 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.08■□□□□ 0.8
ATP2A1O14983 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
ATP2A1O14983 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
ATP2A1O14983 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP2A1O14983 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ATP2A1O14983 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATP2A1O14983 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP2A1O14983 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP2A1O14983 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ATP2A1O14983 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP2A1O14983 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
ATP2A1O14983 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 CRYGEP-201ENST00000412192 528 ntBASIC20.07■□□□□ 0.8
ATP2A1O14983 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.07■□□□□ 0.8
ATP2A1O14983 MCCD1P2-201ENST00000423228 335 ntBASIC20.07■□□□□ 0.8
ATP2A1O14983 VN2R19P-201ENST00000442399 1052 ntBASIC20.07■□□□□ 0.8
ATP2A1O14983 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 HCG4B-203ENST00000450128 991 ntBASIC20.07■□□□□ 0.8
ATP2A1O14983 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 MIR3687-2-201ENST00000577708 61 ntBASIC20.07■□□□□ 0.8
ATP2A1O14983 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 MIR3687-1-201ENST00000614492 61 ntBASIC20.07■□□□□ 0.8
ATP2A1O14983 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ATP2A1O14983 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP2A1O14983 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP2A1O14983 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATP2A1O14983 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP2A1O14983 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ATP2A1O14983 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ATP2A1O14983 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP2A1O14983 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 AC023274.1-201ENST00000418278 595 ntBASIC20.06■□□□□ 0.8
ATP2A1O14983 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP2A1O14983 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP2A1O14983 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP2A1O14983 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP2A1O14983 AL691403.2-201ENST00000618460 490 ntBASIC20.06■□□□□ 0.8
ATP2A1O14983 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATP2A1O14983 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP2A1O14983 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP2A1O14983 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATP2A1O14983 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP2A1O14983 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
ATP2A1O14983 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP2A1O14983 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
ATP2A1O14983 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP2A1O14983 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 AC097637.2-201ENST00000624096 1997 ntBASIC20.05■□□□□ 0.8
ATP2A1O14983 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP2A1O14983 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms