Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
ABCD4O14678 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 AC068472.1-201ENST00000474589 881 ntBASIC15.6■□□□□ 0.09
ABCD4O14678 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 AC096582.2-201ENST00000510860 516 ntBASIC15.6■□□□□ 0.09
ABCD4O14678 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCD4O14678 AL353801.3-201ENST00000609898 542 ntBASIC15.6■□□□□ 0.09
ABCD4O14678 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.6■□□□□ 0.09
ABCD4O14678 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ABCD4O14678 CICP6-201ENST00000457191 2729 ntBASIC15.6■□□□□ 0.09
ABCD4O14678 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCD4O14678 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
ABCD4O14678 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ABCD4O14678 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCD4O14678 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCD4O14678 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
ABCD4O14678 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCD4O14678 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCD4O14678 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.59■□□□□ 0.09
ABCD4O14678 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
ABCD4O14678 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.59■□□□□ 0.09
ABCD4O14678 KRT16P4-201ENST00000453883 522 ntBASIC15.59■□□□□ 0.09
ABCD4O14678 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.59■□□□□ 0.09
ABCD4O14678 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
ABCD4O14678 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 ESPNP-201ENST00000270691 2015 ntBASIC15.59■□□□□ 0.09
ABCD4O14678 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.59■□□□□ 0.09
ABCD4O14678 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.59■□□□□ 0.09
ABCD4O14678 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCD4O14678 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCD4O14678 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCD4O14678 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
ABCD4O14678 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCD4O14678 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCD4O14678 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCD4O14678 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCD4O14678 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCD4O14678 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCD4O14678 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCD4O14678 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 POM121L3P-201ENST00000419331 1163 ntBASIC15.58■□□□□ 0.08
ABCD4O14678 MTCL1P1-201ENST00000446207 792 ntBASIC15.58■□□□□ 0.08
ABCD4O14678 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.58■□□□□ 0.08
ABCD4O14678 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.58■□□□□ 0.08
ABCD4O14678 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.58■□□□□ 0.08
ABCD4O14678 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.58■□□□□ 0.08
ABCD4O14678 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.58■□□□□ 0.08
ABCD4O14678 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCD4O14678 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
ABCD4O14678 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCD4O14678 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCD4O14678 BNIP3P18-201ENST00000593976 575 ntBASIC15.58■□□□□ 0.08
ABCD4O14678 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ABCD4O14678 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCD4O14678 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ABCD4O14678 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCD4O14678 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
ABCD4O14678 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCD4O14678 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms