Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
FOXN3O00409 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
FOXN3O00409 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXN3O00409 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 AC022211.2-201ENST00000585075 2527 ntBASIC18.82■□□□□ 0.6
FOXN3O00409 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXN3O00409 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXN3O00409 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.82■□□□□ 0.6
FOXN3O00409 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXN3O00409 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXN3O00409 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 AL358472.4-201ENST00000633140 710 ntBASIC18.82■□□□□ 0.6
FOXN3O00409 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 AC016396.2-201ENST00000562575 1417 ntBASIC18.82■□□□□ 0.6
FOXN3O00409 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXN3O00409 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXN3O00409 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 AC233702.3-201ENST00000578656 1387 ntBASIC18.81■□□□□ 0.6
FOXN3O00409 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN3O00409 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.81■□□□□ 0.6
FOXN3O00409 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
FOXN3O00409 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 DRAXINP1-201ENST00000437611 948 ntBASIC18.81■□□□□ 0.6
FOXN3O00409 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.81■□□□□ 0.6
FOXN3O00409 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 TPSP2-201ENST00000561760 610 ntBASIC18.81■□□□□ 0.6
FOXN3O00409 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.81■□□□□ 0.6
FOXN3O00409 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN3O00409 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 AP000550.4-202ENST00000639755 178 ntBASIC18.81■□□□□ 0.6
FOXN3O00409 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN3O00409 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.81■□□□□ 0.6
FOXN3O00409 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN3O00409 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN3O00409 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXN3O00409 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXN3O00409 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
FOXN3O00409 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN3O00409 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms