Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A1O00337 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC28A1O00337 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC28A1O00337 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC28A1O00337 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC28A1O00337 COX5BP2-201ENST00000392354 334 ntBASIC16.94■□□□□ 0.3
SLC28A1O00337 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC28A1O00337 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A1O00337 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC28A1O00337 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC28A1O00337 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A1O00337 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC28A1O00337 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC28A1O00337 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A1O00337 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC28A1O00337 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC28A1O00337 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
SLC28A1O00337 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC28A1O00337 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 AK4P3-201ENST00000418260 669 ntBASIC16.93■□□□□ 0.3
SLC28A1O00337 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 AC092647.4-201ENST00000457211 535 ntBASIC16.93■□□□□ 0.3
SLC28A1O00337 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.93■□□□□ 0.3
SLC28A1O00337 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC28A1O00337 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.93■□□□□ 0.3
SLC28A1O00337 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A1O00337 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC28A1O00337 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC28A1O00337 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A1O00337 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms