Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 KRT18P29-201ENST00000397031 1267 ntBASIC12.41□□□□□ -0.42
LINC01546A6NGU7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 KRT18P65-201ENST00000439811 1286 ntBASIC12.41□□□□□ -0.42
LINC01546A6NGU7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 TSPY6P-201ENST00000448518 926 ntBASIC12.41□□□□□ -0.42
LINC01546A6NGU7 AC133681.1-201ENST00000465482 601 ntBASIC12.41□□□□□ -0.42
LINC01546A6NGU7 AC113404.2-201ENST00000507884 177 ntBASIC12.41□□□□□ -0.42
LINC01546A6NGU7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 AC112497.1-201ENST00000624824 639 ntBASIC12.41□□□□□ -0.42
LINC01546A6NGU7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.41□□□□□ -0.42
LINC01546A6NGU7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 MESTP1-201ENST00000404287 994 ntBASIC12.4□□□□□ -0.42
LINC01546A6NGU7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AC239809.2-201ENST00000415381 517 ntBASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 UNC93B5-201ENST00000530315 699 ntBASIC12.4□□□□□ -0.42
LINC01546A6NGU7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01546A6NGU7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 FSCN1P1-201ENST00000568912 1481 ntBASIC12.4□□□□□ -0.43
LINC01546A6NGU7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.4□□□□□ -0.43
LINC01546A6NGU7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01546A6NGU7 AC023824.1-201ENST00000562945 2975 ntBASIC12.39□□□□□ -0.43
LINC01546A6NGU7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms