Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RCCD1A6NED2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AC078925.2-201ENST00000624013 1973 ntBASIC18.7■□□□□ 0.58
RCCD1A6NED2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 STK33P1-201ENST00000423835 1218 ntBASIC18.7■□□□□ 0.58
RCCD1A6NED2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AC068472.1-201ENST00000474589 881 ntBASIC18.7■□□□□ 0.58
RCCD1A6NED2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RCCD1A6NED2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RCCD1A6NED2 AC008894.3-201ENST00000624324 3103 ntBASIC18.69■□□□□ 0.58
RCCD1A6NED2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 AC010460.3-201ENST00000511359 1579 ntBASIC18.69■□□□□ 0.58
RCCD1A6NED2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 KRT18P48-201ENST00000434763 852 ntBASIC18.69■□□□□ 0.58
RCCD1A6NED2 MTCL1P1-201ENST00000446207 792 ntBASIC18.69■□□□□ 0.58
RCCD1A6NED2 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 AC090340.1-201ENST00000620778 4980 ntBASIC18.69■□□□□ 0.58
RCCD1A6NED2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 AC093525.9-201ENST00000624961 1746 ntBASIC18.69■□□□□ 0.58
RCCD1A6NED2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RCCD1A6NED2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RCCD1A6NED2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 IGHGP-201ENST00000390555 1178 ntBASIC18.68■□□□□ 0.58
RCCD1A6NED2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 AC096633.1-201ENST00000422446 749 ntBASIC18.68■□□□□ 0.58
RCCD1A6NED2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms