Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 IFNL4P1-201ENST00000607083 540 ntBASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC004263.2-201ENST00000617183 678 ntBASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 LINC01126-201ENST00000623515 1646 ntBASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TSPY19P-201ENST00000418461 509 ntBASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TSPY18P-201ENST00000441642 509 ntBASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 FAAHP1-202ENST00000446499 1238 ntBASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL732292.2-201ENST00000609649 430 ntBASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV4S1A1TA0A5B7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KRT18P31-201ENST00000506277 1292 ntBASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 UNC93B7-201ENST00000509439 705 ntBASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV4S1A1TA0A5B7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms