Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 AC103702.1-201ENST00000548801 2630 ntBASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.48■□□□□ 0.23
TCRBV3S1A0A5B6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 TSPY17P-201ENST00000450329 467 ntBASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV3S1A0A5B6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 SLC25A1P2-201ENST00000430693 912 ntBASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV3S1A0A5B6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TCRBV3S1A0A5B6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 C1QBPP2-201ENST00000528754 825 ntBASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 AC124947.2-201ENST00000547118 1133 ntBASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 AP005242.2-201ENST00000580065 1175 ntBASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV3S1A0A5B6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms