Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 AL512356.2-201ENST00000546955 174 ntBASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 ACTL9-202ENST00000612068 1252 ntBASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 CNN2P2-201ENST00000443536 909 ntBASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 CNN2P3-201ENST00000450201 906 ntBASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AC093520.2-201ENST00000561830 333 ntBASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AL136317.3-201ENST00000618497 906 ntBASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 RNF165-205ENST00000588679 2904 ntBASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC163A0A0D9SF12 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 AL355306.1-201ENST00000415580 579 ntBASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 AC069262.1-201ENST00000539058 672 ntBASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 AC092919.2-201ENST00000623631 1645 ntBASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC163A0A0D9SF12 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 AC063926.2-201ENST00000623766 1308 ntBASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 TIMM8BP1-201ENST00000452384 211 ntBASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 RN7SL589P-201ENST00000481268 310 ntBASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 AC069335.1-201ENST00000489972 472 ntBASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 AL390955.2-201ENST00000603032 514 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms