Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRGV4A0A0C4DH28 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 Z83836.1-201ENST00000624605 1642 ntBASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AL645929.1-201ENST00000420084 975 ntBASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV4A0A0C4DH28 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 GUSBP12-201ENST00000513727 720 ntBASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV4A0A0C4DH28 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
TRGV4A0A0C4DH28 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRGV4A0A0C4DH28 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms