Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.54■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 LINC00265-3P-201ENST00000447588 903 ntBASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 NPAP1P7-201ENST00000613027 823 ntBASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 FAM220CP-201ENST00000395253 831 ntBASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 AC122714.2-201ENST00000502787 707 ntBASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
IGKV1D-43A0A0B4J1Z2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.52■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 KRT8P10-201ENST00000450021 1447 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 AC090340.1-201ENST00000620778 4980 ntBASIC15.51■□□□□ 0.07
IGKV1D-43A0A0B4J1Z2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms