Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 AC136632.2-201ENST00000512891 861 ntBASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 AC027796.2-201ENST00000575326 344 ntBASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 MTDHP5-201ENST00000598980 586 ntBASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 AL355385.1-201ENST00000606123 409 ntBASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 AC073592.5-201ENST00000624854 528 ntBASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX11Q9Y5W9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 KRT18P2-201ENST00000447938 1258 ntBASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX11Q9Y5W9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AC103564.2-201ENST00000432853 1299 ntBASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 DNAJB3-202ENST00000449667 1266 ntBASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX11Q9Y5W9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SNX11Q9Y5W9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX11Q9Y5W9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX11Q9Y5W9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SNX11Q9Y5W9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX11Q9Y5W9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms