Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 AP001330.3-201ENST00000520123 633 ntBASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 AC092171.3-201ENST00000610122 2651 ntBASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAPPC1Q9Y5R8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 GPAT2P1-201ENST00000444924 1672 ntBASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 AC004854.2-201ENST00000608450 1441 ntBASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAPPC1Q9Y5R8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms