Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 AC074051.2-201ENST00000565115 352 ntBASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 AC090616.6-201ENST00000582640 721 ntBASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 AC108359.1-201ENST00000616451 1211 ntBASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 AC093677.2-201ENST00000600169 1863 ntBASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 KRT89P-201ENST00000620027 1478 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AC135776.1-201ENST00000319817 2481 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 MRPL3P1-201ENST00000400109 1033 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AL603841.1-201ENST00000430516 664 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 KRT16P4-201ENST00000453883 522 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AL158211.2-201ENST00000607282 395 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AL353801.3-201ENST00000609898 542 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 LINC00167-201ENST00000530583 1419 ntBASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA4Q9Y5G9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 PHGDH-209ENST00000641074 1780 ntBASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA4Q9Y5G9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 BICD1-207ENST00000551848 1962 ntBASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA4Q9Y5G9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms