Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 AP001094.4-201ENST00000579008 2176 ntBASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC00167-201ENST00000530583 1419 ntBASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 AL355312.1-201ENST00000407115 2176 ntBASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGB3Q9Y5G1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 AL138688.1-201ENST00000624851 1594 ntBASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 AC079602.3-201ENST00000623931 403 ntBASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 AC084018.2-201ENST00000613093 2607 ntBASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGB3Q9Y5G1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms