Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 MIR3687-2-201ENST00000577708 61 ntBASIC18.32■□□□□ 0.52
YIPF1Q9Y548 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 MIR3687-1-201ENST00000614492 61 ntBASIC18.32■□□□□ 0.52
YIPF1Q9Y548 AC004790.2-201ENST00000623588 572 ntBASIC18.32■□□□□ 0.52
YIPF1Q9Y548 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
YIPF1Q9Y548 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 PTCHD3P3-201ENST00000403073 906 ntBASIC18.31■□□□□ 0.52
YIPF1Q9Y548 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 PRSS29P-201ENST00000440800 595 ntBASIC18.31■□□□□ 0.52
YIPF1Q9Y548 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 HCG4B-203ENST00000450128 991 ntBASIC18.31■□□□□ 0.52
YIPF1Q9Y548 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 AC092183.1-201ENST00000469884 875 ntBASIC18.31■□□□□ 0.52
YIPF1Q9Y548 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 AC020763.4-201ENST00000623414 4170 ntBASIC18.31■□□□□ 0.52
YIPF1Q9Y548 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 ABALON-201ENST00000629058 1903 ntBASIC18.31■□□□□ 0.52
YIPF1Q9Y548 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YIPF1Q9Y548 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 REXO1L11P-201ENST00000620964 1927 ntBASIC18.3■□□□□ 0.52
YIPF1Q9Y548 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 AC112482.1-201ENST00000492080 688 ntBASIC18.3■□□□□ 0.52
YIPF1Q9Y548 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 AC018845.2-201ENST00000568326 409 ntBASIC18.3■□□□□ 0.52
YIPF1Q9Y548 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.3■□□□□ 0.52
YIPF1Q9Y548 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 AP002414.1-201ENST00000391405 1147 ntBASIC18.29■□□□□ 0.52
YIPF1Q9Y548 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 MTDHP5-201ENST00000598980 586 ntBASIC18.29■□□□□ 0.52
YIPF1Q9Y548 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
YIPF1Q9Y548 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms