Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4BQ9Y4P1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 AC096582.2-201ENST00000510860 516 ntBASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 AC019129.2-201ENST00000609837 1235 ntBASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATG4BQ9Y4P1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AC139713.2-201ENST00000641328 2723 ntBASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AL138688.1-201ENST00000624851 1594 ntBASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 RCN1P2-201ENST00000398357 915 ntBASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AC002558.1-201ENST00000488906 803 ntBASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AC099336.1-202ENST00000602961 463 ntBASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATG4BQ9Y4P1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATG4BQ9Y4P1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ATG4BQ9Y4P1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATG4BQ9Y4P1 AL049757.1-201ENST00000616842 1596 ntBASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATG4BQ9Y4P1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms