Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 PMS2P4-201ENST00000412466 1052 ntBASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 AC093214.1-201ENST00000511688 1107 ntBASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCBQ9Y3I0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 AL355306.1-201ENST00000415580 579 ntBASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTCBQ9Y3I0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 AL671277.1-201ENST00000429656 993 ntBASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 FAM86C2P-203ENST00000528684 1004 ntBASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTCBQ9Y3I0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
RTCBQ9Y3I0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RTCBQ9Y3I0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RTCBQ9Y3I0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
RTCBQ9Y3I0 AC120498.9-201ENST00000339021 3867 ntBASIC22.02■■□□□ 1.11
RTCBQ9Y3I0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
RTCBQ9Y3I0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 AC005237.2-201ENST00000434368 219 ntBASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 INGX-202ENST00000489074 768 ntBASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 KRT8P48-201ENST00000515599 1220 ntBASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTCBQ9Y3I0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms