Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 KRT18P65-201ENST00000439811 1286 ntBASIC20.21■□□□□ 0.83
USP25Q9UHP3 RASA4DP-201ENST00000460726 1199 ntBASIC20.21■□□□□ 0.83
USP25Q9UHP3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 AC066615.1-201ENST00000640911 628 ntBASIC20.21■□□□□ 0.83
USP25Q9UHP3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP25Q9UHP3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.21■□□□□ 0.83
USP25Q9UHP3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP25Q9UHP3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP25Q9UHP3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 AC100803.2-201ENST00000562459 1963 ntBASIC20.19■□□□□ 0.82
USP25Q9UHP3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 LIN28AP1-201ENST00000429574 405 ntBASIC20.19■□□□□ 0.82
USP25Q9UHP3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 AL023973.1-201ENST00000624619 620 ntBASIC20.19■□□□□ 0.82
USP25Q9UHP3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.19■□□□□ 0.82
USP25Q9UHP3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP25Q9UHP3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 COX11P1-201ENST00000489116 835 ntBASIC20.18■□□□□ 0.82
USP25Q9UHP3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms