Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 OR7E14P-202ENST00000530490 1290 ntBASIC16.57■□□□□ 0.24
CTSFQ9UBX1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 AC139887.3-201ENST00000568585 713 ntBASIC16.57■□□□□ 0.24
CTSFQ9UBX1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 AC109462.3-201ENST00000573934 613 ntBASIC16.57■□□□□ 0.24
CTSFQ9UBX1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 AC073592.4-201ENST00000623827 446 ntBASIC16.57■□□□□ 0.24
CTSFQ9UBX1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.57■□□□□ 0.24
CTSFQ9UBX1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 AC007613.1-201ENST00000572811 2597 ntBASIC16.56■□□□□ 0.24
CTSFQ9UBX1 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.56■□□□□ 0.24
CTSFQ9UBX1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.56■□□□□ 0.24
CTSFQ9UBX1 BCL2-203ENST00000589955 5011 ntBASIC16.56■□□□□ 0.24
CTSFQ9UBX1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.56■□□□□ 0.24
CTSFQ9UBX1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 RPS2P28-201ENST00000314255 741 ntBASIC16.55■□□□□ 0.24
CTSFQ9UBX1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 KLF4P1-201ENST00000412782 1185 ntBASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AC012640.2-201ENST00000561606 901 ntBASIC16.55■□□□□ 0.24
CTSFQ9UBX1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AL022326.1-202ENST00000641533 845 ntBASIC16.55■□□□□ 0.24
CTSFQ9UBX1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.55■□□□□ 0.24
CTSFQ9UBX1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms