Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 LINC00982-205ENST00000420957 435 ntBASIC18.49■□□□□ 0.55
CHD7Q9P2D1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 AL359881.2-201ENST00000602973 570 ntBASIC18.49■□□□□ 0.55
CHD7Q9P2D1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD7Q9P2D1 AC092580.3-201ENST00000430932 139 ntBASIC18.48■□□□□ 0.55
CHD7Q9P2D1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC009336.1-201ENST00000608941 1553 ntBASIC18.48■□□□□ 0.55
CHD7Q9P2D1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC097493.3-201ENST00000509725 367 ntBASIC18.48■□□□□ 0.55
CHD7Q9P2D1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC140878.1-201ENST00000565277 250 ntBASIC18.48■□□□□ 0.55
CHD7Q9P2D1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AC007064.4-201ENST00000637740 555 ntBASIC18.48■□□□□ 0.55
CHD7Q9P2D1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CHD7Q9P2D1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 AC084121.4-201ENST00000641598 221 ntBASIC18.47■□□□□ 0.55
CHD7Q9P2D1 AF228730.8-201ENST00000642140 221 ntBASIC18.47■□□□□ 0.55
CHD7Q9P2D1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 AL590787.1-201ENST00000568856 1315 ntBASIC18.47■□□□□ 0.55
CHD7Q9P2D1 COX5BP8-201ENST00000416911 349 ntBASIC18.47■□□□□ 0.55
CHD7Q9P2D1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 LINC01225-203ENST00000563550 1244 ntBASIC18.47■□□□□ 0.55
CHD7Q9P2D1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.47■□□□□ 0.55
CHD7Q9P2D1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 AC022494.1-201ENST00000466044 728 ntBASIC18.46■□□□□ 0.55
CHD7Q9P2D1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms