Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 DDX43P3-201ENST00000441064 443 ntBASIC16.16■□□□□ 0.18
LRFN1Q9P244 AC092910.1-201ENST00000482027 1129 ntBASIC16.16■□□□□ 0.18
LRFN1Q9P244 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 AC106730.1-201ENST00000566722 1090 ntBASIC16.16■□□□□ 0.18
LRFN1Q9P244 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 AC023511.2-201ENST00000618803 211 ntBASIC16.16■□□□□ 0.18
LRFN1Q9P244 AC107918.4-202ENST00000641623 219 ntBASIC16.16■□□□□ 0.18
LRFN1Q9P244 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 AC004817.3-201ENST00000602957 2129 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 SPDYE21P-201ENST00000413323 827 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 LAGE3P1-201ENST00000425356 484 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 SIGLEC16-201ENST00000599858 1437 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 AL049757.1-201ENST00000616842 1596 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 AC008735.5-201ENST00000623544 497 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 AC073592.4-201ENST00000623827 446 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 AL353593.2-201ENST00000602529 1483 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 AC009113.1-201ENST00000570267 2443 ntBASIC16.15■□□□□ 0.18
LRFN1Q9P244 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN1Q9P244 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN1Q9P244 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LRFN1Q9P244 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 AL020989.1-201ENST00000422979 469 ntBASIC16.14■□□□□ 0.17
LRFN1Q9P244 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 AC105339.3-201ENST00000560043 636 ntBASIC16.14■□□□□ 0.17
LRFN1Q9P244 AC012640.2-201ENST00000561606 901 ntBASIC16.14■□□□□ 0.17
LRFN1Q9P244 AL671883.3-201ENST00000603274 991 ntBASIC16.14■□□□□ 0.17
LRFN1Q9P244 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN1Q9P244 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN1Q9P244 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms