Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 AC104692.2-201ENST00000603054 253 ntBASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 AC064862.7-201ENST00000604520 867 ntBASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 AC139713.2-201ENST00000641328 2723 ntBASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
NCKIPSDQ9NZQ3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NCKIPSDQ9NZQ3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 POM121L3P-201ENST00000419331 1163 ntBASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 MINOS1P3-201ENST00000457048 203 ntBASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 AL121912.1-201ENST00000603683 238 ntBASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 AL024508.2-201ENST00000607749 1894 ntBASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCKIPSDQ9NZQ3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 AC012313.1-201ENST00000593393 3059 ntBASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCKIPSDQ9NZQ3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCKIPSDQ9NZQ3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms