Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 FAM8A6P-201ENST00000407496 1135 ntBASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 AL590326.2-201ENST00000625139 305 ntBASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 CROCCP2-202ENST00000412962 2773 ntBASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIN7CQ9NUP9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 AC106820.2-201ENST00000563775 3264 ntBASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIN7CQ9NUP9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 RASA4DP-201ENST00000460726 1199 ntBASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 LINC01451-201ENST00000623792 534 ntBASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.66□□□□□ -0.06
LIN7CQ9NUP9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms