Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 AC005332.8-201ENST00000622750 2735 ntBASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 OR6D1P-202ENST00000641007 5290 ntBASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF304Q9HCX3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 DDX43P3-201ENST00000441064 443 ntBASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 FGFR3P6-201ENST00000457012 610 ntBASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 KRT18P55-202ENST00000578578 1546 ntBASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 AC009949.1-201ENST00000623048 1830 ntBASIC16.73■□□□□ 0.27
ZNF304Q9HCX3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 TP73-AS1-207ENST00000624167 988 ntBASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF304Q9HCX3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF304Q9HCX3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms