Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AC105339.3-201ENST00000560043 636 ntBASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AC006557.2-201ENST00000592985 1240 ntBASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 AL135999.2-201ENST00000622438 1686 ntBASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSNK1G1Q9HCP0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 AC097637.2-201ENST00000624096 1997 ntBASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.53
CSNK1G1Q9HCP0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 ACTG1P4-201ENST00000425123 1122 ntBASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G1Q9HCP0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 AL590627.1-203ENST00000421194 1026 ntBASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 IGHV3-22-201ENST00000520721 359 ntBASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 AL353135.1-201ENST00000606729 504 ntBASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 AL139424.1-201ENST00000607572 797 ntBASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1G1Q9HCP0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G1Q9HCP0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms