Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 MIR564-202ENST00000385049 94 ntBASIC16.79■□□□□ 0.28
VCX3BQ9H321 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VCX3BQ9H321 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VCX3BQ9H321 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 AC231657.2-201ENST00000624556 255 ntBASIC16.78■□□□□ 0.28
VCX3BQ9H321 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
VCX3BQ9H321 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VCX3BQ9H321 AC132872.4-202ENST00000622924 2756 ntBASIC16.77■□□□□ 0.28
VCX3BQ9H321 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.77■□□□□ 0.28
VCX3BQ9H321 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCX3BQ9H321 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
VCX3BQ9H321 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCX3BQ9H321 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms