Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC68Q9H2F9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 Z83836.1-201ENST00000624605 1642 ntBASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC68Q9H2F9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AC141586.5-201ENST00000624546 2050 ntBASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 KRT8P47-201ENST00000604727 1398 ntBASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 PKD1P5-201ENST00000532415 10291 ntBASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AL390719.2-201ENST00000606993 987 ntBASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AC083849.1-201ENST00000615227 514 ntBASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC68Q9H2F9 AC133963.1-201ENST00000504166 1679 ntBASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 AL645929.1-201ENST00000420084 975 ntBASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 MTCL1P1-201ENST00000446207 792 ntBASIC17.67■□□□□ 0.42
CCDC68Q9H2F9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms