Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VPS11Q9H270 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS11Q9H270 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VPS11Q9H270 REXO1L11P-201ENST00000620964 1927 ntBASIC17.73■□□□□ 0.43
VPS11Q9H270 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS11Q9H270 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VPS11Q9H270 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS11Q9H270 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS11Q9H270 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS11Q9H270 AC105020.1-201ENST00000435356 2205 ntBASIC17.73■□□□□ 0.43
VPS11Q9H270 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS11Q9H270 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS11Q9H270 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
VPS11Q9H270 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
VPS11Q9H270 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS11Q9H270 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VPS11Q9H270 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VPS11Q9H270 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VPS11Q9H270 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 AP000523.1-201ENST00000398242 1049 ntBASIC17.72■□□□□ 0.43
VPS11Q9H270 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
VPS11Q9H270 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.72■□□□□ 0.43
VPS11Q9H270 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.72■□□□□ 0.43
VPS11Q9H270 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VPS11Q9H270 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
VPS11Q9H270 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VPS11Q9H270 PCDHB19P-201ENST00000570871 2371 ntBASIC17.72■□□□□ 0.43
VPS11Q9H270 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VPS11Q9H270 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS11Q9H270 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VPS11Q9H270 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS11Q9H270 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VPS11Q9H270 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 ECEL1P3-201ENST00000427961 737 ntBASIC17.71■□□□□ 0.43
VPS11Q9H270 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS11Q9H270 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS11Q9H270 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS11Q9H270 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS11Q9H270 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS11Q9H270 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS11Q9H270 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS11Q9H270 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS11Q9H270 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS11Q9H270 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS11Q9H270 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS11Q9H270 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms