Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC046185.3-201ENST00000623228 1824 ntBASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH11XQ9BZA7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 BCRP1-201ENST00000444246 691 ntBASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 CYP51A1P2-201ENST00000419457 1499 ntBASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH11XQ9BZA7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 SLC25A6P2-201ENST00000497974 877 ntBASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 AC109322.1-201ENST00000524499 1264 ntBASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
PCDH11XQ9BZA7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
PCDH11XQ9BZA7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 AL035633.1-201ENST00000406139 838 ntBASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 AC087163.2-201ENST00000457299 853 ntBASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 AL096865.1-201ENST00000606796 927 ntBASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH11XQ9BZA7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 AC025678.2-201ENST00000562061 970 ntBASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH11XQ9BZA7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms