Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 AC079602.3-201ENST00000623931 403 ntBASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 AL023973.1-201ENST00000624619 620 ntBASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 TMEM191A-211ENST00000637163 1067 ntBASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 AP006294.2-201ENST00000641667 209 ntBASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.89□□□□□ -0.03
HDHD3Q9BSH5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 CROCCP1-201ENST00000426910 5675 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 LINC01568-207ENST00000641790 1380 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 AP000523.1-201ENST00000398242 1049 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 AC004263.2-201ENST00000617183 678 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 AC141257.4-201ENST00000634557 245 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 AC136944.6-201ENST00000634818 245 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 AL118508.1-201ENST00000613502 2345 ntBASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.88□□□□□ -0.03
HDHD3Q9BSH5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HDHD3Q9BSH5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms