Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AC016396.2-201ENST00000562575 1417 ntBASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 TSSC2-201ENST00000450217 709 ntBASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 AC116353.5-201ENST00000638148 1699 ntBASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB18PQ96TA0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
PCDHB18PQ96TA0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 AC246785.2-201ENST00000432512 513 ntBASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 AC122714.2-201ENST00000502787 707 ntBASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 KRT8P10-201ENST00000450021 1447 ntBASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB18PQ96TA0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 TPSP2-201ENST00000561760 610 ntBASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB18PQ96TA0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms