Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 AC116407.4-201ENST00000623319 1061 ntBASIC16.68■□□□□ 0.26
COL21A1Q96P44 AP000550.4-202ENST00000639755 178 ntBASIC16.68■□□□□ 0.26
COL21A1Q96P44 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL21A1Q96P44 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
COL21A1Q96P44 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 TSPY22P-201ENST00000427496 604 ntBASIC16.67■□□□□ 0.26
COL21A1Q96P44 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.67■□□□□ 0.26
COL21A1Q96P44 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.67■□□□□ 0.26
COL21A1Q96P44 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL21A1Q96P44 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL21A1Q96P44 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.66■□□□□ 0.26
COL21A1Q96P44 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL21A1Q96P44 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.65■□□□□ 0.26
COL21A1Q96P44 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms