Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF558Q96NG5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AL645939.2-201ENST00000427340 991 ntBASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 ACTG1P14-201ENST00000446382 1122 ntBASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AP000974.1-201ENST00000623909 2387 ntBASIC18.6■□□□□ 0.57
ZNF558Q96NG5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF558Q96NG5 AP000997.3-201ENST00000623333 2250 ntBASIC18.6■□□□□ 0.57
ZNF558Q96NG5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF558Q96NG5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF558Q96NG5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 CXCL1P1-201ENST00000502804 216 ntBASIC18.58■□□□□ 0.56
ZNF558Q96NG5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF558Q96NG5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms