Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
SNRNP40Q96DI7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 AL035633.1-201ENST00000406139 838 ntBASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 AC023141.13-201ENST00000604991 943 ntBASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 AC091812.2-201ENST00000619081 385 ntBASIC15.77■□□□□ 0.12
SNRNP40Q96DI7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.77■□□□□ 0.11
SNRNP40Q96DI7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 STK25P1-201ENST00000585406 838 ntBASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 AC004835.2-201ENST00000603762 682 ntBASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.76■□□□□ 0.11
SNRNP40Q96DI7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AP000974.1-201ENST00000623909 2387 ntBASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AL353135.1-201ENST00000606729 504 ntBASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNRNP40Q96DI7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SNRNP40Q96DI7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.74■□□□□ 0.11
SNRNP40Q96DI7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.74■□□□□ 0.11
SNRNP40Q96DI7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms