Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.59■□□□□ 0.41
ECHDC3Q96DC8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.59■□□□□ 0.41
ECHDC3Q96DC8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ECHDC3Q96DC8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ECHDC3Q96DC8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ECHDC3Q96DC8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.59■□□□□ 0.41
ECHDC3Q96DC8 AC138932.1-201ENST00000534164 6830 ntBASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
ECHDC3Q96DC8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 AF186996.4-201ENST00000467186 377 ntBASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 MTDHP4-201ENST00000600287 670 ntBASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 AC004817.3-201ENST00000602957 2129 ntBASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 AC148477.8-201ENST00000624298 468 ntBASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ECHDC3Q96DC8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 HNRNPDP1-201ENST00000439535 754 ntBASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 AL773604.1-201ENST00000617417 272 ntBASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ECHDC3Q96DC8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.56■□□□□ 0.4
ECHDC3Q96DC8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms