Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 PVRIG2P-201ENST00000435460 978 ntBASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 AC009949.1-201ENST00000623048 1830 ntBASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXRED1Q96CU9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 AC113347.1-201ENST00000413321 391 ntBASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 LIN28AP1-201ENST00000429574 405 ntBASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 SLC25A3P1-201ENST00000443844 931 ntBASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 MIR3917-201ENST00000580971 93 ntBASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 REXO1L11P-201ENST00000620964 1927 ntBASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXRED1Q96CU9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.33■□□□□ 0.05
FOXRED1Q96CU9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 KRT18P65-201ENST00000439811 1286 ntBASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 ATP5G1P1-201ENST00000448724 379 ntBASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
FOXRED1Q96CU9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms