Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GCSHP2-201ENST00000560971 527 ntBASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 AL023973.1-201ENST00000624619 620 ntBASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.86□□□□□ -0.03
RTN4IP1Q8WWV3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 AC073508.3-201ENST00000619697 1419 ntBASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 BX664615.1-201ENST00000443558 458 ntBASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 AC034232.1-201ENST00000506026 1064 ntBASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RTN4IP1Q8WWV3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 HLA-J-201ENST00000462773 1622 ntBASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 LINC00304-203ENST00000565008 1864 ntBASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms