Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 PCDHA14-201ENST00000506751 2298 ntBASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC44A1Q8WWI5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 LINC02012-201ENST00000608206 1725 ntBASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 SLC25A1P3-201ENST00000395415 828 ntBASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 HLA-F-220ENST00000434407 884 ntBASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 FLJ38576-201ENST00000623820 2459 ntBASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC44A1Q8WWI5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC44A1Q8WWI5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 AC005915.1-201ENST00000624912 2018 ntBASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 PCDHB19P-201ENST00000570871 2371 ntBASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 AL023973.1-201ENST00000624619 620 ntBASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 LINC01568-207ENST00000641790 1380 ntBASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC44A1Q8WWI5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC44A1Q8WWI5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms