Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 AL020989.1-201ENST00000422979 469 ntBASIC20.71■□□□□ 0.91
STAG1Q8WVM7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 NKAPP1-205ENST00000585790 367 ntBASIC20.71■□□□□ 0.91
STAG1Q8WVM7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 HLA-A-201ENST00000376802 1334 ntBASIC20.71■□□□□ 0.91
STAG1Q8WVM7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 LYSMD4-203ENST00000378904 2122 ntBASIC20.71■□□□□ 0.91
STAG1Q8WVM7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
STAG1Q8WVM7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
STAG1Q8WVM7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 SCARNA2-201ENST00000458748 420 ntBASIC20.69■□□□□ 0.9
STAG1Q8WVM7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
STAG1Q8WVM7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 PRYP5-201ENST00000451909 266 ntBASIC20.68■□□□□ 0.9
STAG1Q8WVM7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 AC079776.4-201ENST00000511039 504 ntBASIC20.68■□□□□ 0.9
STAG1Q8WVM7 RNA5SP419-201ENST00000515908 135 ntBASIC20.68■□□□□ 0.9
STAG1Q8WVM7 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
STAG1Q8WVM7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms