Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 AP002414.1-201ENST00000391405 1147 ntBASIC30.04■■■□□ 2.4
TRIM41Q8WV44 ATP5G2P4-201ENST00000442175 420 ntBASIC30.04■■■□□ 2.4
TRIM41Q8WV44 AC002472.2-201ENST00000442739 958 ntBASIC30.04■■■□□ 2.4
TRIM41Q8WV44 RBSN-204ENST00000449050 903 ntTSL 2 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC30.04■■■□□ 2.4
TRIM41Q8WV44 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
TRIM41Q8WV44 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 MED29-202ENST00000594368 1471 ntTSL 2 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 GRAP-202ENST00000395635 834 ntTSL 2 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 RNA5SP421-201ENST00000516864 134 ntBASIC30.02■■■□□ 2.4
TRIM41Q8WV44 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 ABALON-201ENST00000629058 1903 ntBASIC30.02■■■□□ 2.4
TRIM41Q8WV44 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TRIM41Q8WV44 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
TRIM41Q8WV44 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 CTNS-203ENST00000399306 803 ntTSL 3 BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 ABCD1P5-201ENST00000445663 754 ntBASIC30.01■■■□□ 2.39
TRIM41Q8WV44 NMU-203ENST00000507338 658 ntTSL 3 BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 AL390955.2-201ENST00000603032 514 ntBASIC30.01■■■□□ 2.39
TRIM41Q8WV44 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TRIM41Q8WV44 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC30■■■□□ 2.39
TRIM41Q8WV44 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC30■■■□□ 2.39
TRIM41Q8WV44 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
TRIM41Q8WV44 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC30■■■□□ 2.39
TRIM41Q8WV44 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC30■■■□□ 2.39
TRIM41Q8WV44 AP005117.1-201ENST00000584346 1413 ntBASIC30■■■□□ 2.39
TRIM41Q8WV44 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 RAB17-203ENST00000409576 466 ntTSL 3 BASIC30■■■□□ 2.39
TRIM41Q8WV44 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC30■■■□□ 2.39
TRIM41Q8WV44 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC30■■■□□ 2.39
TRIM41Q8WV44 AC105339.3-201ENST00000560043 636 ntBASIC30■■■□□ 2.39
TRIM41Q8WV44 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC30■■■□□ 2.39
TRIM41Q8WV44 AC073592.5-201ENST00000624854 528 ntBASIC30■■■□□ 2.39
TRIM41Q8WV44 AC092902.6-201ENST00000641783 218 ntBASIC30■■■□□ 2.39
TRIM41Q8WV44 AC092865.6-201ENST00000642101 219 ntBASIC30■■■□□ 2.39
TRIM41Q8WV44 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 FLJ13224-201ENST00000313737 1514 ntBASIC30■■■□□ 2.39
TRIM41Q8WV44 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TRIM41Q8WV44 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC30■■■□□ 2.39
TRIM41Q8WV44 ADM-208ENST00000534464 1640 ntTSL 2 BASIC30■■■□□ 2.39
TRIM41Q8WV44 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC30■■■□□ 2.39
TRIM41Q8WV44 PXK-206ENST00000463280 2825 ntTSL 2 BASIC30■■■□□ 2.39
TRIM41Q8WV44 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC29.99■■■□□ 2.39
TRIM41Q8WV44 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TRIM41Q8WV44 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC29.99■■■□□ 2.39
TRIM41Q8WV44 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TRIM41Q8WV44 AC009949.1-201ENST00000623048 1830 ntBASIC29.99■■■□□ 2.39
TRIM41Q8WV44 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TRIM41Q8WV44 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms