Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 MED15P5-201ENST00000423150 992 ntBASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AC006557.2-201ENST00000592985 1240 ntBASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AL356488.2-201ENST00000602755 427 ntBASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AP000997.3-201ENST00000623333 2250 ntBASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH3RF2Q8TEC5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 KRT18P27-201ENST00000427733 1299 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 AC109462.3-201ENST00000573934 613 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 AC019129.2-201ENST00000609837 1235 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 FAM197Y3-203ENST00000618346 717 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 AC139530.3-201ENST00000620344 690 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 MIR1199-201ENST00000621445 119 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.23■□□□□ 0.51
SH3RF2Q8TEC5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 KLF4P1-201ENST00000412782 1185 ntBASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 DDX43P3-201ENST00000441064 443 ntBASIC18.22■□□□□ 0.51
SH3RF2Q8TEC5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms